Index A | B | C | D | E | F | G | H | I | J | K | L | M | N | O | P | Q | R | S | T | U | V | W | Y A absolute() (in module conatus.expert) active() (conatus.expert.KSDomainContinuation method) adapt (conatus.expert.ContinuationSettings attribute) add_bc() (conatus.expert.Problem method) add_equation() (conatus.expert.Problem method) adjoint() (conatus.expert.InnerProduct method) admissible() (conatus.expert.ParametricEVP method) AmbiguousNameError amplitude_equation() (in module conatus.expert) amplitude_policy (conatus.expert.DMD attribute) amplitudes (conatus.expert.DMD attribute) angle() (conatus.expert.FirstFourierModeSlice method) Annulus (class in conatus) AnnulusBasis (class in conatus.expert) as_guess() (conatus.expert.NLBVPSolution method) ASSEMBLY (conatus.expert.Plan attribute) at() (conatus.expert.KSDomainContinuation method) (conatus.Model method) attach() (conatus.runs.Run method), [1] AzimuthalMFold (class in conatus.expert) B BackendError backward_error() (conatus.expert.HillBlocks method) Ball (class in conatus) BallBasis (class in conatus.expert) base_flow_sensitivity() (in module conatus.expert) based_on (conatus.expert.ChannelUnits attribute) bases (conatus.model.Compiled attribute) (conatus.problems.Ready attribute) BaseStateWarning basis (conatus.expert.ChannelBaseFlow attribute) basis() (conatus.expert.Domain method) basis_table() (conatus.Annulus method) (conatus.Ball method) (conatus.Box method) (conatus.Disk method) (conatus.MappedBox method) (conatus.Pipe method) (conatus.Shell method) (conatus.Sphere method) (conatus.TaylorCouette method) bc_rows() (conatus.expert.IVPSolver method) bc_time (conatus.expert.IVPSolver property) between() (in module conatus) beyn() (in module conatus.contour) BeynResult (class in conatus.contour) bisect() (conatus.expert.EdgeTracker method) border_distance() (conatus.expert.FirstFourierModeSlice method) boundaries() (conatus.Box method) (conatus.MappedBox method) BoundaryConditionError bounded_coord (conatus.Box property) (conatus.MappedBox property) Box (class in conatus) box() (in module conatus) branch_switch() (in module conatus.expert) C cache_lookup() (conatus.runs.Registry method) cache_report (conatus.runs.Run property), [1] CartesianCoordinates (class in conatus.expert) centre() (conatus.expert.AzimuthalMFold method) (conatus.expert.Reflection method) (conatus.expert.ShiftReflect method) CertifiedRoot (class in conatus.expert) certify() (conatus.expert.CertifiedRoot method) (conatus.runs.Run method), [1] CFL (class in conatus.expert) cfl() (conatus.model.Simulation method) Channel() (in module conatus) channel() (in module conatus.expert) (in module conatus.problems) channel_evp() (in module conatus.problems) CHANNEL_SYSTEMS (in module conatus.expert) ChannelBaseFlow (class in conatus.expert) ChannelUnits (class in conatus.expert) Chebyshev (class in conatus.expert) ChebyshevT (in module conatus.expert) ChebyshevU() (in module conatus.expert) ChebyshevV() (in module conatus.expert) Check (class in conatus.expert) check() (conatus.expert.DataInnerProduct method) (conatus.expert.EVP method) (conatus.expert.Plan method) (conatus.expert.Problem method) checkpoints() (conatus.model.Simulation method) checks (conatus.expert.VerificationReport attribute) children() (conatus.runs.Registry method) close() (conatus.runs.Run method), [1] coeff_space() (conatus.expert.AnnulusBasis method) (conatus.expert.BallBasis method) (conatus.expert.Chebyshev method) (conatus.expert.ComplexFourier method) (conatus.expert.CompoundChebyshev method) (conatus.expert.DiskBasis method) (conatus.expert.Hermite method) (conatus.expert.Jacobi method) (conatus.expert.Laguerre method) (conatus.expert.Legendre method) (conatus.expert.MappedChebyshev method) (conatus.expert.RealFourier method) (conatus.expert.ShellBasis method) (conatus.expert.SphereBasis method) (conatus.expert.Ultraspherical method) coeffs (conatus.expert.LBVPSolution attribute) (conatus.expert.NLBVPSolution attribute) coeffs() (conatus.expert.IVPSolver method) (conatus.model.Simulation method) coeffs_of() (conatus.expert.NLBVPContinuation method) colloc_values() (conatus.expert.PeriodicOrbitProblem method) CollocationMesh (class in conatus.expert) columns (conatus.contour.BeynResult attribute) comp() (in module conatus.expert) compare() (in module conatus.runs), [1] compare_adjoints() (in module conatus.expert) compile() (conatus.Model method) (conatus.model.Linearization method) Compiled (class in conatus.model) ComplexFourier (class in conatus.expert) CompoundChebyshev (class in conatus.expert) compute() (conatus.expert.CFL method) ConatusError confidence() (conatus.expert.SPOD method) conj() (in module conatus.expert) context (conatus.expert.EVPResult attribute) continuation() (conatus.expert.KSDomainContinuation method) ContinuationSettings (class in conatus.expert) continue_codim2() (in module conatus.expert) continue_equilibria() (in module conatus.expert) continue_orbits() (in module conatus.expert) contour (conatus.contour.RegionEVPResult attribute) control (conatus.contour.CountResult attribute) convention (conatus.expert.Energy attribute) converged (conatus.expert.CertifiedRoot attribute) (conatus.expert.NLBVPSolution attribute) (conatus.expert.SecantRoot attribute) convergence (conatus.expert.CertifiedRoot attribute) ConvergenceError convert() (in module conatus.expert) coordinate() (conatus.expert.LBVPSolution method) (conatus.model.Simulation method) CoordinateError coords (conatus.expert.Domain property) coordsys (conatus.model.Compiled attribute) coordsys() (conatus.Ball method) (conatus.Box method) (conatus.Disk method) (conatus.Pipe method) (conatus.Sphere method) (conatus.TaylorCouette method) CorrectnessWarning cos() (in module conatus.expert) cos_mode_observable() (in module conatus.expert) count (conatus.contour.BeynResult property) (conatus.contour.CountResult attribute) (conatus.contour.RegionEVPResult attribute) count() (in module conatus.contour) count_method (conatus.contour.BeynResult property) (conatus.contour.CountResult property) (conatus.contour.RegionEVPResult attribute) counted (conatus.contour.BeynResult attribute) CountResult (class in conatus.contour) critical() (in module conatus.expert) CriticalPoint (class in conatus.expert) cross() (in module conatus.expert) crossing_tol (conatus.expert.ContinuationSettings attribute) curl() (in module conatus.expert) curvilinear (conatus.expert.CylindricalCoordinates attribute) (conatus.expert.PolarCoordinates attribute) (conatus.expert.S2Coordinates attribute) (conatus.expert.SphericalCoordinates attribute) CylindricalCoordinates (class in conatus.expert) D data (conatus.expert.FieldData attribute) DataInnerProduct (class in conatus.expert) ddx() (conatus.expert.FourierOps method) dealias (conatus.model.Compiled attribute) dealias_default (conatus.model.Compiled attribute) decisions() (conatus.model.Compiled method) DefaultChoiceWarning define() (conatus.Model method) degree (conatus.model.Compiled attribute) dense() (conatus.expert.HillBlocks method) derivative() (conatus.expert.ParametricEVP method) det (conatus.expert.AzimuthalMFold attribute) (conatus.expert.ShiftReflect attribute) diff() (in module conatus.expert) dim (conatus.expert.Domain property) directions (conatus.expert.RankReport attribute) discrete_system() (conatus.expert.NewtonSolver method) DiscretizationError discretize() (conatus.Model method) (conatus.model.Compiled method) (conatus.model.Linearization method) (in module conatus.expert) Disk (class in conatus) DiskBasis (class in conatus.expert) div() (in module conatus.expert) DMD (class in conatus.expert) dmd() (in module conatus.expert) doc (conatus.expert.AmbiguousNameError attribute) (conatus.expert.BackendError attribute) (conatus.expert.BoundaryConditionError attribute) (conatus.expert.ConatusError attribute) (conatus.expert.ConvergenceError attribute) (conatus.expert.CoordinateError attribute) (conatus.expert.DiscretizationError attribute) (conatus.expert.DtypeError attribute) (conatus.expert.EquationError attribute) (conatus.expert.EquationSyntaxError attribute) (conatus.expert.InputTypeError attribute) (conatus.expert.MissingDependencyError attribute) (conatus.expert.MissingFileError attribute) (conatus.expert.NewtonNotConverged attribute) (conatus.expert.NonlinearLHSError attribute) (conatus.expert.NumericalError attribute) (conatus.expert.OptionError attribute) (conatus.expert.ParameterError attribute) (conatus.expert.RankError attribute) (conatus.expert.ResolutionError attribute) (conatus.expert.SpectralError attribute) (conatus.expert.SymmetryBreakingError attribute) (conatus.expert.SymmetryError attribute) (conatus.expert.TensorError attribute) (conatus.expert.UndeclaredVariableError attribute) (conatus.expert.UnsupportedError attribute) doctor() (in module conatus) Domain (class in conatus.expert) domain (conatus.expert.ChannelBaseFlow attribute) (conatus.model.Compiled attribute) dot() (in module conatus.expert) dp_fd (conatus.expert.ContinuationSettings attribute) drift (conatus.expert.EVPResult attribute) ds (conatus.expert.ContinuationSettings attribute) ds_max (conatus.expert.ContinuationSettings attribute) ds_min (conatus.expert.ContinuationSettings attribute) dt (conatus.expert.DMD attribute) (conatus.expert.SPOD attribute) (conatus.model.Simulation property) dt() (in module conatus.expert) DtypeError dye() (conatus.Model method) (conatus.model.Simulation method) E ecs_system() (in module conatus.expert) edge_note (conatus.expert.CriticalPoint attribute) EdgeTracker (class in conatus.expert) edmd() (in module conatus.expert) effective_order (conatus.expert.IVPSolver property) eigenvalue (conatus.expert.EVPResult attribute) (conatus.model.Compiled attribute) eigenvalue() (conatus.Model method) eigenvalues (conatus.expert.DMD attribute) (conatus.expert.SPOD attribute) eigenvalues() (conatus.expert.KSDomainContinuation method) (conatus.Model method) (conatus.model.Linearization method) (in module conatus.expert) embed() (conatus.expert.Plan method) (conatus.expert.SymmetrySubspace method) EmbeddedError (class in conatus.expert) Energy (class in conatus.expert) energy() (conatus.expert.KSDomainContinuation method) energy_factor() (in module conatus.expert) Ensemble (class in conatus.expert) ensemble_fate() (in module conatus.expert) eq_layouts() (conatus.expert.Plan method) equation_components (conatus.expert.RankReport attribute) EquationError equations() (conatus.Model method) EquationSyntaxError equatorial (conatus.expert.Reflection property) EquatorialParity() (in module conatus.expert) equidistributed_mesh() (conatus.expert.PeriodicOrbitProblem method) Equilibrium (class in conatus.expert) equilibrium_eigenvalues() (in module conatus.expert) eta (conatus.TaylorCouette property) euclidean() (conatus.expert.DataInnerProduct class method) evaluate() (conatus.model.Simulation method) evaluations (conatus.contour.CountResult attribute) (conatus.expert.CriticalPoint attribute) EVEN (in module conatus.expert) event_max_iterations (conatus.expert.ContinuationSettings attribute) EVP (class in conatus.expert) EVPResult (class in conatus.expert) exp() (in module conatus.expert) ExperimentalWarning explain() (conatus.contour.BeynResult method) (conatus.contour.CountResult method) (conatus.contour.RegionEVPResult method) (conatus.expert.AzimuthalMFold method) (conatus.expert.CartesianCoordinates method) (conatus.expert.CertifiedRoot method) (conatus.expert.CFL method) (conatus.expert.ChannelBaseFlow method) (conatus.expert.ChannelUnits method) (conatus.expert.Check method) (conatus.expert.CollocationMesh method) (conatus.expert.ConatusError method) (conatus.expert.ContinuationSettings method) (conatus.expert.CriticalPoint method) (conatus.expert.CylindricalCoordinates method) (conatus.expert.DataInnerProduct method) (conatus.expert.DMD method) (conatus.expert.Domain method) (conatus.expert.EdgeTracker method) (conatus.expert.EmbeddedError method) (conatus.expert.Energy method) (conatus.expert.Ensemble method) (conatus.expert.EVPResult method) (conatus.expert.FieldData method) (conatus.expert.FirstFourierModeSlice method) (conatus.expert.FlowMap method) (conatus.expert.FourierOps method) (conatus.expert.HillBlocks method) (conatus.expert.HillGPU method) (conatus.expert.InnerProduct method) (conatus.expert.IVPSolver method) (conatus.expert.KSDomainContinuation method) (conatus.expert.LBVPSolution method) (conatus.expert.NewtonKrylovHookstep method) (conatus.expert.NewtonSolver method) (conatus.expert.NLBVPContinuation method) (conatus.expert.NLBVPSolution method) (conatus.expert.ParametricEVP method) (conatus.expert.PeriodicNewtonSolver method) (conatus.expert.PeriodicOrbitProblem method) (conatus.expert.Plan method) (conatus.expert.PoincareSection method) (conatus.expert.PolarCoordinates method) (conatus.expert.Problem method) (conatus.expert.RankReport method) (conatus.expert.Reflection method) (conatus.expert.S2Coordinates method) (conatus.expert.SecantRoot method) (conatus.expert.ShiftReflect method) (conatus.expert.SphericalCoordinates method) (conatus.expert.SPOD method) (conatus.expert.SymmetrySubspace method) (conatus.expert.TauWatch method) (conatus.expert.ThresholdBisection method) (conatus.expert.UnitSystem method) (conatus.expert.VerificationReport method) (conatus.Model method) (conatus.model.Compiled method) (conatus.model.Linearization method) (conatus.model.Simulation method) (conatus.problems.Ready method) (conatus.runs.Registry method) (conatus.runs.Run method), [1] (conatus.runs.RunList method) (in module conatus.expert) (in module conatus.runs) exponents_dense() (in module conatus.expert) export() (in module conatus.runs) export_mlflow() (in module conatus.runs) extras (conatus.problems.Ready attribute) F F (conatus.expert.DataInnerProduct attribute) F() (conatus.expert.Ensemble method) (conatus.expert.IVPSolver method) factor() (conatus.expert.HillBlocks method) family (conatus.expert.AnnulusBasis attribute) (conatus.expert.BallBasis attribute) (conatus.expert.Chebyshev attribute) (conatus.expert.ComplexFourier attribute) (conatus.expert.CompoundChebyshev attribute) (conatus.expert.DiskBasis attribute) (conatus.expert.Hermite attribute) (conatus.expert.Jacobi attribute) (conatus.expert.Laguerre attribute) (conatus.expert.Legendre attribute) (conatus.expert.MappedChebyshev attribute) (conatus.expert.RealFourier attribute) (conatus.expert.ShellBasis attribute) (conatus.expert.SphereBasis attribute) (conatus.expert.Ultraspherical attribute) (conatus.expert.UnitSystem attribute) fast_iterations (conatus.expert.ContinuationSettings attribute) fate() (conatus.expert.EdgeTracker method) fft_length() (conatus.expert.AnnulusBasis method) (conatus.expert.Chebyshev method) (conatus.expert.ShellBasis method) Field (class in conatus.expert) field (conatus.expert.FieldData attribute) field() (conatus.expert.ChannelBaseFlow method) FieldData (class in conatus.expert) fields (conatus.model.Compiled attribute) (conatus.problems.Ready attribute) file_path() (conatus.runs.Run method), [1] filter_note (conatus.expert.EVPResult attribute) find() (in module conatus.runs), [1] find_connection() (in module conatus.expert) find_equilibrium() (in module conatus.expert) find_relative_periodic_orbit() (in module conatus.expert) find_rpo_in_slice() (in module conatus.expert) find_travelling_wave() (in module conatus.expert) first_return_map() (in module conatus.expert) FirstFourierModeSlice (class in conatus.expert) flagged (conatus.expert.EVPResult property) flips() (conatus.expert.AzimuthalMFold method) floquet() (conatus.model.Linearization method) floquet_exponents() (in module conatus.expert) floquet_multipliers() (in module conatus.expert) floquet_vector() (conatus.expert.PeriodicOrbitProblem method) FlowMap (class in conatus.expert) flowmap() (conatus.model.Simulation method) fold_tol (conatus.expert.ContinuationSettings attribute) folded (conatus.expert.CertifiedRoot property) formula() (conatus.expert.RationalMap method) (conatus.expert.TanhMap method) (conatus.expert.TanMap method) FourierOps (class in conatus.expert) free_slip (in module conatus) frequencies (conatus.expert.DMD property) (conatus.expert.SPOD attribute) from_dedalus() (in module conatus) from_grid() (conatus.expert.DataInnerProduct class method) from_solvers() (conatus.expert.Ensemble class method) full() (conatus.expert.KSDomainContinuation method) function() (conatus.Model method) G gain() (in module conatus.expert) gauge (conatus.model.Compiled attribute) gauge_components (conatus.expert.RankReport attribute) generators (conatus.expert.SymmetrySubspace attribute) get() (in module conatus.runs), [1] ginzburg_landau() (in module conatus.expert) ginzburg_landau_exact() (in module conatus.expert) given() (conatus.Model method) globalize() (in module conatus.expert) gmres_maxiter (conatus.expert.NewtonKrylovHookstep property) gpu_available() (in module conatus.expert) gpu_report() (in module conatus.expert) grad() (in module conatus.expert) gram() (conatus.expert.DataInnerProduct class method) (conatus.expert.InnerProduct method) grid() (conatus.expert.IVPSolver method) (conatus.expert.LBVPSolution method) (conatus.expert.NLBVPSolution method) (conatus.model.Simulation method) (in module conatus.expert) grid_size (conatus.expert.CompoundChebyshev property) grid_sizes() (conatus.expert.CompoundChebyshev method) group() (conatus.model.Linearization method) groups (conatus.expert.Plan property) GroupWarning growth (conatus.expert.CriticalPoint attribute) (conatus.expert.EVPResult attribute) growth_note (conatus.expert.EVPResult attribute) growth_rates (conatus.expert.DMD property) growth_rule() (conatus.expert.EVPResult method) H h (conatus.expert.CollocationMesh property) half() (conatus.expert.DataInnerProduct method) half_line() (in module conatus) harmonics (conatus.expert.HillBlocks property) (conatus.model.Linearization property) has() (conatus.expert.Domain method) Hermite (class in conatus.expert) hill_from_plan() (in module conatus.expert) HillBlocks (class in conatus.expert) HillGPU (class in conatus.expert) hopf_imag_tol (conatus.expert.ContinuationSettings attribute) hyperplane() (conatus.expert.PoincareSection class method) I illposed (conatus.model.Compiled attribute) IllPosedWarning impose_bc() (conatus.expert.IVPSolver method) index() (conatus.runs.Registry method) infinite (conatus.expert.RationalMap attribute) initial() (conatus.model.Simulation method) initial_coeffs() (conatus.expert.NewtonSolver method) InitialDataWarning inner() (conatus.expert.DataInnerProduct method) (conatus.expert.InnerProduct method) inner_product (conatus.expert.DMD attribute) (conatus.expert.SPOD attribute) InnerProduct (class in conatus.expert) InputTypeError integ() (in module conatus.expert) interfaces (conatus.Box property) (conatus.expert.CompoundChebyshev property) (conatus.MappedBox property) interp() (in module conatus.expert) interpolate() (conatus.expert.PeriodicOrbitProblem method) ir_system() (in module conatus.expert) is_fixed() (conatus.expert.AzimuthalMFold method) (conatus.expert.Reflection method) (conatus.expert.ShiftReflect method) iteration (conatus.model.Simulation property) iterations (conatus.contour.BeynResult attribute) (conatus.expert.CertifiedRoot attribute) (conatus.expert.NLBVPSolution attribute) (conatus.expert.SecantRoot attribute) IVP (class in conatus.expert) IVPSolver (class in conatus.expert) J Jacobi (class in conatus.expert) jacobian() (conatus.expert.KSDomainContinuation method) (conatus.expert.PeriodicNewtonSolver method) (conatus.expert.PeriodicOrbitProblem method) jvp() (conatus.expert.FlowMap method) K kaplan_yorke() (in module conatus.expert) keeps() (conatus.expert.AzimuthalMFold method) key (conatus.expert.AzimuthalMFold property) (conatus.expert.Domain property) (conatus.expert.Reflection property) (conatus.expert.ShiftReflect property) kind (conatus.Annulus attribute) (conatus.Ball attribute) (conatus.Box attribute) (conatus.Disk attribute) (conatus.expert.CartesianCoordinates attribute) (conatus.expert.CylindricalCoordinates attribute) (conatus.expert.DataInnerProduct attribute) (conatus.expert.EVP attribute) (conatus.expert.IVP attribute) (conatus.expert.LBVP attribute) (conatus.expert.NLBVP attribute) (conatus.expert.PolarCoordinates attribute) (conatus.expert.Problem attribute) (conatus.expert.RationalMap attribute) (conatus.expert.S2Coordinates attribute) (conatus.expert.SphericalCoordinates attribute) (conatus.expert.TanhMap attribute) (conatus.expert.TanMap attribute) (conatus.MappedBox attribute) (conatus.model.Compiled attribute) (conatus.Pipe attribute) (conatus.Shell attribute) (conatus.Sphere attribute) (conatus.TaylorCouette attribute) kolmogorov() (in module conatus.problems) KSDomainContinuation (class in conatus.expert) kuramoto_sivashinsky() (in module conatus.problems) L label (conatus.expert.EVPResult attribute) labels (conatus.model.Compiled attribute) Laguerre (class in conatus.expert) laminar() (conatus.expert.ChannelUnits method) laminar_poiseuille() (in module conatus.expert) lap() (in module conatus.expert) last_step (conatus.expert.SecantRoot attribute) layout (conatus.expert.FieldData attribute) LBVP (class in conatus.expert) LBVPSolution (class in conatus.expert) least_stable() (conatus.expert.ParametricEVP method) left (conatus.expert.EVPResult attribute) Legendre (class in conatus.expert) lift() (in module conatus.expert) line() (in module conatus) lineage() (conatus.runs.Run method), [1] (in module conatus.runs), [1] linear_ginzburg_landau() (in module conatus.expert) Linearization (class in conatus.model) linearize() (conatus.expert.IVP method) (conatus.Model method) (in module conatus.expert) Lmax (conatus.expert.SphereBasis property) load() (conatus.runs.Registry method) (conatus.runs.Run class method), [1] load_checkpoint() (conatus.expert.IVPSolver method) load_field() (conatus.runs.Run method), [1] log (conatus.contour.BeynResult attribute) (conatus.contour.CountResult attribute) (conatus.expert.CriticalPoint attribute) (conatus.expert.EVPResult attribute) log() (conatus.runs.Run method), [1] (in module conatus.expert) lookup() (conatus.expert.SymmetrySubspace method) lyapunov() (conatus.model.Simulation method) lyapunov_spectrum() (in module conatus.expert) M manual_steps (conatus.expert.VerificationReport property) MappedBox (class in conatus) MappedChebyshev (class in conatus.expert) matrices() (conatus.expert.ParametricEVP method) (conatus.expert.Plan method) matvec() (conatus.expert.HillBlocks method) max_growth() (in module conatus.expert) max_iterations (conatus.expert.ContinuationSettings property) max_newton (conatus.expert.ContinuationSettings attribute) max_points (conatus.expert.ContinuationSettings attribute) max_residual (conatus.expert.LBVPSolution property) mean_policy (conatus.expert.SPOD attribute) memory_report() (conatus.expert.IVPSolver method) method (conatus.expert.DMD attribute) (conatus.expert.EVPResult attribute) methods() (conatus.expert.Plan method) (conatus.model.Simulation method) (in module conatus.expert) metric() (conatus.expert.CartesianCoordinates method) (conatus.expert.CylindricalCoordinates method) (conatus.expert.PolarCoordinates method) (conatus.expert.RationalMap method) (conatus.expert.S2Coordinates method) (conatus.expert.SphericalCoordinates method) (conatus.expert.TanhMap method) (conatus.expert.TanMap method) mirror() (conatus.expert.AzimuthalMFold method) (conatus.expert.Reflection method) (conatus.expert.ShiftReflect method) misfit (conatus.expert.DMD attribute) MissingDependencyError MissingFileError mode (conatus.expert.CriticalPoint attribute) mode() (conatus.expert.EVPResult method) Model (class in conatus) model (conatus.model.Compiled attribute) modes (conatus.expert.DMD attribute) (conatus.expert.SPOD attribute) moments (conatus.contour.BeynResult attribute) monodromy() (conatus.expert.PeriodicOrbitProblem method) monomials() (in module conatus.expert) mu (conatus.expert.CertifiedRoot attribute) (conatus.expert.SecantRoot attribute) multiplicity (conatus.contour.BeynResult attribute) (conatus.contour.RegionEVPResult attribute) multipliers() (conatus.expert.PeriodicOrbitProblem method) N n (conatus.expert.DataInnerProduct attribute) N (conatus.model.Compiled attribute) n_infinite (conatus.expert.EVPResult attribute) n_walls() (conatus.Box method) (conatus.MappedBox method) name (conatus.expert.Check attribute) (conatus.expert.UnitSystem attribute) (conatus.runs.Run property), [1] navier_slip() (in module conatus) nblocks (conatus.expert.SPOD attribute) ncc (conatus.expert.ChannelBaseFlow attribute) (conatus.model.Compiled attribute) (conatus.problems.Ready attribute) ncc_fields() (conatus.expert.Problem method) ncc_reports (conatus.expert.Plan attribute) ncol (conatus.expert.CollocationMesh attribute) NewtonKrylovHookstep (class in conatus.expert) NewtonNotConverged NewtonSolver (class in conatus.expert) nfft (conatus.expert.SPOD attribute) NLBVP (class in conatus.expert) NLBVPContinuation (class in conatus.expert) NLBVPSolution (class in conatus.expert) nlop() (conatus.model.Simulation method) no_slip (in module conatus) nonlinear_variables() (conatus.expert.NLBVP method) NonlinearLHSError nonperiodic_coords (conatus.expert.Domain property) nonpoly (conatus.model.Compiled attribute) norm() (conatus.expert.InnerProduct method) normal_form() (in module conatus.expert) note (conatus.expert.DataInnerProduct attribute) notes (conatus.expert.DMD attribute) (conatus.expert.NLBVPSolution attribute) (conatus.expert.SPOD attribute) (conatus.model.Compiled attribute) (conatus.problems.Ready attribute) noverlap (conatus.expert.SPOD attribute) npts (conatus.expert.CollocationMesh property) ntst (conatus.expert.CollocationMesh attribute) numerical_abscissa() (in module conatus.expert) NumericalError O observed_orders() (conatus.expert.NLBVPSolution method) ODD (in module conatus.expert) odd_mask() (conatus.expert.FourierOps method) ode_problem() (in module conatus.expert) offsets (conatus.expert.CompoundChebyshev property) omega (conatus.expert.DMD attribute) on_border() (conatus.expert.FirstFourierModeSlice method) onesided (conatus.expert.SPOD attribute) operator (conatus.contour.BeynResult attribute) (conatus.contour.CountResult attribute) optimal_gain() (conatus.model.Linearization method) (in module conatus.expert) OptionError order (conatus.expert.AzimuthalMFold property) (conatus.expert.ShiftReflect attribute) (conatus.expert.SymmetrySubspace property) order() (conatus.expert.EVPResult method) outer() (in module conatus.expert) output() (conatus.model.Simulation method) over (conatus.expert.CriticalPoint attribute) overrides (conatus.model.Compiled attribute) P pack() (conatus.expert.PeriodicNewtonSolver method) pair() (conatus.expert.FlowMap method) parallel_shear_flow() (in module conatus.expert) Parameter (class in conatus.expert) parameter (conatus.expert.CriticalPoint attribute) ParameterError parameters (conatus.problems.Ready attribute) parametric() (conatus.Model method) (conatus.model.Linearization method) ParametricEVP (class in conatus.expert) params (conatus.expert.CertifiedRoot attribute) (conatus.model.Compiled attribute) (conatus.runs.Run property), [1] parent (conatus.runs.Run property), [1] parities (conatus.expert.SymmetrySubspace attribute) parity (conatus.model.Compiled attribute) parity() (conatus.expert.SymmetrySubspace method) pars() (conatus.expert.PeriodicOrbitProblem method) parse_equation() (in module conatus) parse_expr() (in module conatus) particles() (conatus.model.Simulation method) path (conatus.runs.Run property), [1] periodic() (in module conatus) periodic_operator() (conatus.model.Linearization method) (in module conatus.expert) PeriodicNewtonSolver (class in conatus.expert) PeriodicOrbitProblem (class in conatus.expert) phase_step (conatus.contour.CountResult attribute) piece_of() (conatus.expert.CompoundChebyshev method) pieces (conatus.expert.CompoundChebyshev property) Pipe (class in conatus) pipe() (in module conatus.problems) pipe_evp() (in module conatus.problems) Plan (class in conatus.expert) plan (conatus.expert.LBVPSolution attribute) (conatus.expert.NLBVPSolution attribute) plane_couette() (in module conatus.problems) plane_couette_evp() (in module conatus.problems) pod() (in module conatus.expert) poincare_section() (in module conatus.expert) PoincareSection (class in conatus.expert) PolarCoordinates (class in conatus.expert) poles (conatus.contour.CountResult attribute) pressure() (conatus.Model method) Problem (class in conatus.expert) problem (conatus.model.Compiled attribute) (conatus.problems.Ready attribute) ProblemError (in module conatus.expert) profile (conatus.expert.ChannelBaseFlow attribute) profile() (conatus.expert.IVPSolver method) (in module conatus) project() (conatus.expert.Plan method) (conatus.expert.SymmetrySubspace method) propagator() (in module conatus.expert) properties() (conatus.model.Simulation method) proportion_ci() (in module conatus.expert) Q quadrature (conatus.contour.BeynResult attribute) quadrature() (conatus.expert.DataInnerProduct class method) query_ids() (conatus.runs.Registry method) R radius (conatus.expert.BallBasis property) (conatus.expert.DiskBasis property) radius_ratio (conatus.TaylorCouette property) rank (conatus.contour.BeynResult attribute) (conatus.expert.DMD attribute) rank_report() (conatus.expert.Plan method) (conatus.expert.Problem method) RankError RankReport (class in conatus.expert) RationalMap (class in conatus.expert) rayleigh_benard() (in module conatus.problems) rayleigh_benard_evp() (in module conatus.problems) rbf() (in module conatus.expert) Re (conatus.expert.ChannelUnits attribute) Ready (class in conatus.problems) RealFourier (class in conatus.expert) reasons (conatus.expert.CertifiedRoot attribute) (conatus.expert.SecantRoot attribute) rebuild() (conatus.expert.Field method) (conatus.expert.Parameter method) recipe (conatus.Annulus attribute) (conatus.Ball attribute) (conatus.Disk attribute) (conatus.Pipe attribute) (conatus.Shell attribute) (conatus.Sphere attribute) (conatus.TaylorCouette attribute) reconstruct() (conatus.expert.DMD method) (conatus.expert.FirstFourierModeSlice method) record() (in module conatus.runs), [1] reduce() (conatus.expert.FirstFourierModeSlice method) reduce_trajectory() (conatus.expert.FirstFourierModeSlice method) reduced (conatus.expert.LBVPSolution attribute) reference (conatus.problems.Ready attribute) reflect() (conatus.expert.FourierOps method) Reflection (class in conatus.expert) refresh() (conatus.runs.Run method), [1] region (conatus.contour.BeynResult attribute) (conatus.contour.CountResult attribute) (conatus.contour.RegionEVPResult attribute) RegionEVPResult (class in conatus.contour) Registry (class in conatus.runs) regularity() (conatus.expert.CartesianCoordinates method) (conatus.expert.CylindricalCoordinates method) (conatus.expert.PolarCoordinates method) (conatus.expert.S2Coordinates method) (conatus.expert.SphericalCoordinates method) reindex() (conatus.runs.Registry method) remesh() (conatus.expert.PeriodicOrbitProblem method) reproduce() (conatus.runs.Run method), [1] (in module conatus.runs), [1] residual (conatus.expert.CertifiedRoot attribute) (conatus.expert.NLBVPSolution property) (conatus.expert.SecantRoot attribute) residual() (conatus.expert.KSDomainContinuation method) (conatus.expert.PeriodicNewtonSolver method) (conatus.expert.PeriodicOrbitProblem method) residual_tol (conatus.contour.BeynResult attribute) residuals (conatus.contour.BeynResult attribute) (conatus.expert.DMD attribute) (conatus.expert.EVPResult attribute) (conatus.expert.LBVPSolution attribute) residue() (conatus.expert.AzimuthalMFold method) resolution() (conatus.Box method) resolution_report() (conatus.expert.Plan method) ResolutionError ResolutionWarning resolve_growth() (conatus.expert.ParametricEVP method) resolve_id() (conatus.runs.Registry method) restart() (conatus.model.Simulation method) restore (conatus.expert.FlowMap attribute) result() (conatus.runs.Run method), [1] results (conatus.runs.Run property), [1] resume_or_start() (conatus.model.Simulation method) retract() (conatus.expert.CertifiedRoot method) (conatus.runs.Run method), [1] revolve_cost() (in module conatus.expert) reynolds (conatus.expert.UnitSystem attribute) rk_stages() (conatus.expert.Ensemble method) (conatus.expert.IVPSolver method) rotating_shell_convection() (in module conatus.problems) rotating_shell_convection_evp() (in module conatus.problems) rounds (conatus.contour.BeynResult attribute) Run (class in conatus.runs), [1] run() (conatus.expert.EdgeTracker method) (conatus.expert.Ensemble method) (conatus.expert.IVPSolver method) (conatus.expert.KSDomainContinuation method) (conatus.expert.NLBVPContinuation method) (conatus.expert.ThresholdBisection method) (conatus.model.Simulation method) run_dir() (conatus.runs.Registry method) run_graph() (conatus.expert.IVPSolver method) RunList (class in conatus.runs) S S2Coordinates (class in conatus.expert) save() (conatus.model.Simulation method) save_checkpoint() (conatus.expert.IVPSolver method) save_field() (conatus.runs.Run method), [1] save_file() (conatus.runs.Run method), [1] scalar() (conatus.Model method) scale() (conatus.expert.UnitSystem method) scale_factors() (conatus.expert.CartesianCoordinates method) (conatus.expert.CylindricalCoordinates method) (conatus.expert.PolarCoordinates method) (conatus.expert.S2Coordinates method) (conatus.expert.SphericalCoordinates method) scales (conatus.expert.UnitSystem attribute) scan_connection() (in module conatus.expert) SCHEMES (in module conatus.expert) secant_root() (in module conatus.expert) SecantRoot (class in conatus.expert) seed (conatus.contour.BeynResult attribute) select() (conatus.contour.RegionEVPResult method) (conatus.expert.EVPResult method) sensitivity() (conatus.expert.ParametricEVP method) separable_coords (conatus.expert.Domain property) series() (conatus.runs.Run method), [1] (in module conatus) set_drift() (conatus.expert.ParametricEVP method) set_dt() (conatus.expert.IVPSolver method) set_mesh() (conatus.expert.PeriodicOrbitProblem method) set_reference() (conatus.expert.PeriodicOrbitProblem method) set_state() (conatus.expert.IVPSolver method) set_states() (conatus.expert.Ensemble method) set_status() (conatus.runs.Run method), [1] settings (conatus.expert.NLBVPSolution attribute) shape (conatus.expert.Domain property) Shell (class in conatus) shell_floquet() (in module conatus.expert) ShellBasis (class in conatus.expert) shift() (conatus.expert.FirstFourierModeSlice method) ShiftReflect (class in conatus.expert) sign() (in module conatus.expert) simulate() (conatus.Model method) Simulation (class in conatus.model) sin() (in module conatus.expert) sincos_coord (conatus.Box property) (conatus.MappedBox property) singular_values (conatus.contour.BeynResult attribute) (conatus.expert.DMD attribute) singularity (conatus.expert.CylindricalCoordinates attribute) (conatus.expert.PolarCoordinates attribute) (conatus.expert.S2Coordinates attribute) (conatus.expert.SphericalCoordinates attribute) slice_condition() (conatus.expert.FirstFourierModeSlice method) slice_equilibrium_check() (in module conatus.expert) slogdet() (conatus.expert.HillBlocks method) (conatus.expert.HillGPU method) smallest_at (conatus.contour.CountResult attribute) smallest_step (conatus.contour.CountResult attribute) solve() (conatus.expert.HillBlocks method) (conatus.expert.NewtonKrylovHookstep method) (conatus.expert.NewtonSolver method) (conatus.expert.ParametricEVP method) (conatus.expert.PeriodicNewtonSolver method) (conatus.expert.Plan method) (conatus.Model method) solve_dense() (in module conatus.expert) solve_sparse() (in module conatus.expert) SpectralError spectrum() (in module conatus) Sphere (class in conatus) SphereBasis (class in conatus.expert) SphericalCoordinates (class in conatus.expert) split (conatus.model.Compiled attribute) split() (conatus.expert.PeriodicOrbitProblem method) SPOD (class in conatus.expert) spod() (in module conatus.expert) spurious (conatus.expert.EVPResult attribute) spurious_note (conatus.expert.EVPResult attribute) sqrt() (in module conatus.expert) square (conatus.expert.RankReport property) state (conatus.runs.Run property), [1] state_space() (in module conatus.expert) states() (conatus.expert.Ensemble method) status (conatus.expert.CertifiedRoot attribute) (conatus.expert.Check property) (conatus.expert.RankReport property) (conatus.runs.Run property), [1] step() (conatus.expert.EmbeddedError method) (conatus.expert.Ensemble method) (conatus.expert.IVPSolver method) StopRun structural_sensitivity() (in module conatus.expert) summary() (conatus.model.Compiled method) swift_hohenberg() (in module conatus.problems) symmetry (conatus.model.Compiled attribute) symmetry_breaking_check() (conatus.expert.SymmetrySubspace method) (in module conatus.expert) symmetry_report() (conatus.expert.Problem method) SymmetryBreakingError SymmetryError SymmetrySubspace (class in conatus.expert) sync() (conatus.runs.Registry method) system (conatus.expert.ChannelUnits property) T t (conatus.model.Simulation property) tags (conatus.runs.Run property), [1] tails (conatus.expert.EVPResult attribute) tanh() (in module conatus.expert) TanhMap (class in conatus.expert) TanMap (class in conatus.expert) taus (conatus.model.Compiled attribute) TauWatch (class in conatus.expert) taylor_couette() (in module conatus.problems) taylor_couette_evp() (in module conatus.problems) TaylorCouette (class in conatus) TensorError TensorField() (in module conatus.expert) threshold (conatus.expert.Check attribute) ThresholdBisection (class in conatus.expert) time (conatus.model.Compiled attribute) time_average() (in module conatus) times() (conatus.expert.CollocationMesh method) tmesh (conatus.expert.CollocationMesh attribute) to_dataframe() (conatus.runs.RunList method) (in module conatus.runs) to_grid() (conatus.expert.Plan method) to_total() (conatus.expert.Energy method) tol (conatus.expert.ContinuationSettings property) (conatus.expert.SecantRoot attribute) tolerance (conatus.expert.ContinuationSettings attribute) track() (conatus.expert.ParametricEVP method) (in module conatus.runs), [1] trajectory() (conatus.expert.FlowMap method) translate() (conatus.expert.FourierOps method) trivial (conatus.expert.NLBVPSolution attribute) turbulent() (conatus.expert.ChannelUnits method) U U (conatus.expert.ChannelBaseFlow attribute) Ultraspherical (class in conatus.expert) unbounded (conatus.expert.Hermite attribute) (conatus.expert.Laguerre attribute) uncertainty() (in module conatus) UndeclaredVariableError UnderResolvedWarning unhalf() (conatus.expert.DataInnerProduct method) uniform() (conatus.expert.CollocationMesh class method) union() (conatus.expert.Domain static method) unit_vector() (in module conatus.expert) UnitSystem (class in conatus.expert) unknown_degree (conatus.model.Compiled attribute) unpack() (conatus.expert.PeriodicNewtonSolver method) unresolved (conatus.expert.EVPResult property) unresolved_note (conatus.expert.CriticalPoint attribute) (conatus.expert.EVPResult attribute) unstable_manifold() (in module conatus.expert) UnsupportedError unwatch() (conatus.model.Simulation method) update_status() (conatus.runs.Registry method) V value (conatus.expert.Check attribute) (conatus.expert.CriticalPoint attribute) (conatus.expert.Energy attribute) value() (conatus.expert.NLBVPSolution method) values (conatus.contour.BeynResult attribute) (conatus.expert.EVPResult attribute) var_layouts() (conatus.expert.Plan method) variable_components (conatus.expert.RankReport attribute) vector() (conatus.Model method) vector_of() (conatus.expert.NLBVPContinuation method) VectorField() (in module conatus.expert) vectors (conatus.contour.BeynResult attribute) (conatus.expert.EVPResult attribute) velocity() (conatus.expert.FirstFourierModeSlice method) (conatus.Model method) VerificationReport (class in conatus.expert) verified (conatus.expert.CriticalPoint attribute) verify() (in module conatus.expert) view() (in module conatus) vjp() (conatus.expert.FlowMap method) vjp_physical() (conatus.expert.FlowMap method) VJPSuspended W w (conatus.expert.DataInnerProduct attribute) wall_coord (conatus.Box property) (conatus.MappedBox property) walls() (in module conatus) watch() (conatus.model.Simulation method) wavenumber_names() (conatus.model.Linearization method) what (conatus.expert.Check attribute) winding (conatus.contour.CountResult attribute) winding() (conatus.expert.HillBlocks method) winding_error (conatus.contour.CountResult attribute) window (conatus.expert.SPOD attribute) with_basis() (conatus.expert.Domain method) without() (conatus.expert.Domain method) Y y (conatus.expert.ChannelBaseFlow attribute) Y (in module conatus.expert)